Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Genome Summary
Methylorubrum extorquens AM1 str. DM4
Accession NumberNC_012988.1
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | METD_RS26020 | Not Available | - | 5664518 - 5665369 | 32145.8 |
| hypothetical protein | METD_RS26025 | Not Available | - | 5665465 - 5666118 | 23419.9 |
| hypothetical protein | METD_RS26030 | Not Available | - | 5666245 - 5667483 | 45476.6 |
| cation:proton antiporter | METD_RS26035 | Not Available | + | 5667786 - 5669678 | 65753.6 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | METD_RS26040 | Not Available | - | 5669713 - 5671080 | 47387.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | METD_RS26045 | Not Available | - | 5671105 - 5672187 | 38972.7 |
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | METD_RS26050 | Not Available | - | 5672293 - 5673756 | 50542.9 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | METD_RS26055 | Not Available | - | 5673753 - 5675231 | 50617.1 |
| peptidoglycan d,d-transpeptidase ftsi family protein | METD_RS26060 | Not Available | - | 5675291 - 5677168 | 67411.6 |
| hypothetical protein | METD_RS26065 | Not Available | - | 5677176 - 5677607 | 15638.8 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling