Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Genome Summary
Methylorubrum extorquens AM1 str. DM4
Accession NumberNC_012988.1
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | METD_RS02105 | Not Available | + | 432102 - 432335 | 8508.25 |
| type ii toxin-antitoxin system rele/pare family toxin | METD_RS02110 | Not Available | + | 432332 - 432619 | 10830.2 |
| penicillin-binding protein activator | METD_RS02115 | Not Available | - | 432641 - 433852 | 41319.3 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | METD_RS02120 | Not Available | + | 433973 - 434923 | 33342.1 |
| yran family protein | METD_RS02125 | Not Available | + | 434907 - 435293 | 13905.1 |
| response regulator | METD_RS02130 | Not Available | - | 435323 - 435712 | 13695.5 |
| abc transporter substrate-binding protein | METD_RS02135 | Not Available | + | 436005 - 436916 | 31608.1 |
| abc transporter permease subunit | METD_RS02140 | Not Available | + | 436913 - 438055 | 37299.0 |
| abc transporter permease | METD_RS02145 | Not Available | + | 438052 - 438780 | 23877.7 |
| l,d-transpeptidase family protein | METD_RS02150 | Not Available | - | 438787 - 439896 | 40146.8 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling