Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis granuli str. TFA
Accession NumberNZ_CP012199.1
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| virb4 family type iv secretion/conjugal transfer atpase | SGRAN_RS02425 | Not Available | - | 517243 - 519612 | 87352.1 |
| type iv secretion system protein virb3 | SGRAN_RS02430 | Not Available | - | 519591 - 519875 | 10873.5 |
| trbc/virb2 family protein | SGRAN_RS02435 | Not Available | - | 519879 - 520208 | 10954.6 |
| trbc/virb2 family protein | SGRAN_RS21445 | Not Available | + | 520403 - 520768 | 12128.9 |
| copper resistance protein copc | SGRAN_RS21450 | Not Available | - | 520786 - 521432 | 23940.8 |
| efflux transporter outer membrane subunit | SGRAN_RS02450 | Not Available | - | 522222 - 523643 | 49559.0 |
| hlyd family secretion protein | SGRAN_RS02455 | Not Available | - | 523646 - 524554 | 33162.6 |
| duf1656 domain-containing protein | SGRAN_RS02460 | Not Available | - | 524565 - 524777 | 7569.63 |
| fusc family protein | SGRAN_RS02465 | Not Available | - | 524774 - 526756 | 71174.1 |
| marr family winged helix-turn-helix transcriptional regulator | SGRAN_RS02470 | Not Available | - | 526753 - 527235 | 17716.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.