Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis granuli str. TFA
Accession NumberNZ_CP012199.1
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lyttr family dna-binding domain-containing protein | SGRAN_RS19590 | Not Available | - | 4266317 - 4267123 | 30298.4 |
| sensor histidine kinase | SGRAN_RS19595 | Not Available | - | 4267120 - 4268244 | 40991.4 |
| helix-turn-helix domain-containing protein | SGRAN_RS19600 | Not Available | - | 4268290 - 4268811 | 19602.8 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | SGRAN_RS19605 | Not Available | + | 4268968 - 4271061 | 78104.0 |
| dps family protein | SGRAN_RS19610 | Not Available | - | 4271335 - 4271790 | 16783.7 |
| hypothetical protein | SGRAN_RS19615 | Not Available | - | 4271908 - 4272459 | 18361.9 |
| hypothetical protein | SGRAN_RS19620 | Not Available | - | 4272504 - 4272833 | 11414.6 |
| ggdef domain-containing protein | SGRAN_RS19625 | Not Available | - | 4272913 - 4273557 | 23628.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SGRAN_RS19630 | Not Available | + | 4273738 - 4274247 | 16905.6 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SGRAN_RS19635 | Not Available | + | 4274254 - 4275351 | 38145.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.