Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis granuli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis granuli str. TFA
Accession NumberNZ_CP012199.1
Gene Summary
Adenine Count
790410 bp
Thymine Count
792050 bp
Guanine Count
1549001 bp
Cytosine Count
1548392 bp
Genome Length
4679853 bp
Protein-coding Genes
4326 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbe | SGRAN_RS00910 | Not Available | - | 190561 - 193014 | 89537.6 |
| virb3 family type iv secretion system protein | SGRAN_RS00915 | Not Available | - | 193028 - 193309 | 9908.41 |
| trbc/virb2 family protein | SGRAN_RS00920 | Not Available | - | 193309 - 193641 | 11384.0 |
| p-type conjugative transfer atpase trbb | SGRAN_RS00925 | Not Available | - | 193638 - 194618 | 34363.4 |
| copg family transcriptional regulator | SGRAN_RS00930 | Not Available | - | 194914 - 195339 | 15564.8 |
| conjugal transfer protein trag | SGRAN_RS00935 | Not Available | - | 195344 - 197329 | 73597.1 |
| vird2 family relaxase/mobilization nuclease | SGRAN_RS00940 | Not Available | - | 197478 - 199217 | 64098.0 |
| lytic transglycosylase domain-containing protein | SGRAN_RS00945 | Not Available | - | 199461 - 200183 | 25173.9 |
| duf736 domain-containing protein | SGRAN_RS00950 | Not Available | - | 200188 - 200520 | 12109.0 |
| s26 family signal peptidase | SGRAN_RS00955 | Not Available | - | 200560 - 201105 | 19590.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.