Paraburkholderia xenovorans LB400

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia xenovorans LB400 is a Gram-negative, non-spore-forming rod-shaped bacterium that typically exists as single cells. This species thrives in various habitats, demonstrating its versatility and adaptability to different environmental conditions. It is an aerobic organism, requiring oxygen for its metabolic processes, which suggests a potential role in biogeochemical cycles where oxygen is present. The optimal growth temperature for P. xenovorans LB400 is approximately 30.0°C, indicating a preference for moderate temperatures that may align with its natural environments, such as soil or contaminated sites. The ability to grow in multiple habitats underscores its ecological significance and potential applications in bioremediation, where it may contribute to the degradation of environmental pollutants. Overall, the physiological characteristics of P. xenovorans LB400 highlight its potential utility in environmental microbiology, particularly in processes that require aerobic biodegradation. Its capability to thrive in diverse settings suggests it may play a role in the microbial community dynamics of various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia xenovorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Paraburkholderia xenovorans LB400
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia xenovorans LB400


Gene Summary

Adenine Count

281537 bp

Thymine Count

281756 bp

Guanine Count

455567 bp

Cytosine Count

452919 bp

Genome Length

1471779 bp

Protein-coding Genes

1350 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
caib/baif coa-transferase family proteinBXE_RS38090Not Available-307999 - 30915341036.6
hypothetical proteinBXE_RS38095Not Available-309171 - 30968618271.8
phosphotransferase family proteinBXE_RS38100Not Available-309679 - 31073438994.7
hypothetical proteinBXE_RS38105Not Available-310765 - 31189842597.2
class i adenylate-forming enzyme family proteinBXE_RS38110Not Available-312071 - 31366357977.7
enoyl-coa hydratase/isomerase family proteinBXE_RS38115Not Available+314024 - 31483629127.2
sdr family nad(p)-dependent oxidoreductaseBXE_RS38120Not Available+314872 - 31563926847.5
pdr/vanb family oxidoreductaseBXE_RS38125Not Available+315689 - 31664534158.0
cytochrome p450BXE_RS38130Not Available+316707 - 31792445855.8
tetr/acrr family transcriptional regulatorBXE_RS38135Not Available+318198 - 31872820469.6

Displaying genes 271 – 280 of 15620 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1785 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da

Displaying 1–10 of 1785 metabolites