Paraburkholderia xenovorans LB400

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia xenovorans LB400 is a Gram-negative, non-spore-forming rod-shaped bacterium that typically exists as single cells. This species thrives in various habitats, demonstrating its versatility and adaptability to different environmental conditions. It is an aerobic organism, requiring oxygen for its metabolic processes, which suggests a potential role in biogeochemical cycles where oxygen is present. The optimal growth temperature for P. xenovorans LB400 is approximately 30.0°C, indicating a preference for moderate temperatures that may align with its natural environments, such as soil or contaminated sites. The ability to grow in multiple habitats underscores its ecological significance and potential applications in bioremediation, where it may contribute to the degradation of environmental pollutants. Overall, the physiological characteristics of P. xenovorans LB400 highlight its potential utility in environmental microbiology, particularly in processes that require aerobic biodegradation. Its capability to thrive in diverse settings suggests it may play a role in the microbial community dynamics of various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia xenovorans
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Paraburkholderia xenovorans LB400
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia xenovorans LB400

Accession NumberNC_007953.1

Gene Summary

Adenine Count

281537 bp

Thymine Count

281756 bp

Guanine Count

455567 bp

Cytosine Count

452919 bp

Genome Length

1471779 bp

Protein-coding Genes

1350 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
abc transporter substrate-binding proteinBXE_RS37415Not Available-146825 - 14789239086.6
chaperonin groelBXE_RS37420Not Available-147961 - 14960157370.5
co-chaperone groesBXE_RS37425Not Available-149615 - 14990510463.6
acyl-coa dehydrogenase family proteinBXE_RS37430Not Available+150312 - 15152943848.9
duf3088 domain-containing proteinBXE_RS37435Not Available+151584 - 15192812594.2
abc transporter substrate-binding proteinBXE_RS37440Not Available+152478 - 15408258512.7
abc transporter permeaseBXE_RS37445Not Available+154096 - 15507635339.2
abc transporter permeaseBXE_RS37450Not Available+155141 - 15611233474.9
abc transporter atp-binding proteinBXE_RS37455Not Available+156115 - 15785463741.4
metq/nlpa family abc transporter substrate-binding proteinBXE_RS37460Not Available-157887 - 15873831319.6

Displaying genes 131 – 140 of 15620 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001971heptanedioateC7H10O4Chemical structure of heptanedioateNot available
Average158.154Da
Monoisotopic158.059006Da
BASm0002131(3S)-hydroxy-3-methylglutaryl-CoAC27H39N7O20P3SChemical structure of (3S)-hydroxy-3-methylglutaryl-CoANot available
Average906.62Da
Monoisotopic906.1183419Da
BASm00030222-methyl-cis-aconitateC7H5O6Chemical structure of 2-methyl-cis-aconitateNot available
Average185.113Da
Monoisotopic185.0102586Da
BASm0003334aldehydo-D-ribose 5-phosphateC5H11O8PChemical structure of aldehydo-D-ribose 5-phosphateNot available
Average230.1098Da
Monoisotopic230.0191538Da
BASm00097983-hydroxybutane-1,2,3-tricarboxylateC7H7O7Chemical structure of 3-hydroxybutane-1,2,3-tricarboxylateNot available
Average203.128Da
Monoisotopic203.0208233Da
BASm0010884(7R,8S)-7,8-diammoniononanoateC9H21N2O2Chemical structure of (7R,8S)-7,8-diammoniononanoateNot available
Average189.278Da
Monoisotopic189.1597543Da
BASm0010887(4R,5S)-dethiobiotinC10H18N2O3Chemical structure of (4R,5S)-dethiobiotin533-48-2
Average214.2615Da
Monoisotopic214.1317425Da

Displaying 1–8 of 8 metabolites