Photobacterium frigidiphilum

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium frigidiphilum is a Gram-negative, rod-shaped bacterium that thrives optimally at temperatures around 16.0°C. This microbe exhibits a facultative aerobic or anaerobic lifestyle, allowing it to adapt to varying oxygen conditions in its environment. The Gram-negative nature of P. frigidiphilum suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane, which is characteristic of this group of bacteria. Its rod shape may confer advantages in motility and nutrient uptake, potentially facilitating its survival in diverse habitats. The optimal growth temperature of 16.0°C indicates that P. frigidiphilum is well-suited for cold environments, which may include marine or polar ecosystems where temperatures are consistently low. Its facultative metabolic capabilities imply that it can utilize both aerobic and anaerobic respiration, enabling it to thrive in environments where oxygen availability fluctuates. This adaptability not only underscores its potential role in nutrient cycling within its ecological niche but also suggests that P. frigidiphilum may play a significant part in the microbial communities of cold aquatic environments, contributing to the overall microbial diversity and functioning in these unique ecosystems. Understanding the traits of P. frigidiphilum may provide insights into the resilience and ecological roles of microorganisms in cold habitats, particularly in the context of climate change and its impact on marine biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium frigidiphilum
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium frigidiphilum

Accession NumberPYMJ00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5624 genes

Non-Coding Genes

222 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
metal-dependent hydrolaseC9J12_00450Not Available-97112 - 9815238996.7
hypothetical proteinC9J12_00455Not Available+98432 - 9875512002.0
histidine kinaseC9J12_00460Not Available+98960 - 9941817028.5
inner membrane protein yhjdC9J12_00465Not Available-99500 - 10042033348.4
Ncrna_class:hammerhead_ribozymeNot AvailableNot Available+100564 - 100635Not Available
asma family proteinC9J12_00470Not Available-100693 - 10284676274.7
uridine kinaseC9J12_00475Not Available-103153 - 10379724285.6
iron-sulfur cluster carrier protein apbcC9J12_00480Not Available-103961 - 10503738595.0
methionine--trna ligaseC9J12_00485Not Available+105316 - 10735877066.8
dicarboxylate/amino acid:cation symporterC9J12_00490Not Available+107937 - 10925046116.7

Displaying genes 171 – 180 of 5846 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites