Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium frigidiphilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium frigidiphilum
Accession NumberPYMJ00000000.1
Gene Summary
Adenine Count
1873058 bp
Thymine Count
1890150 bp
Guanine Count
1353602 bp
Cytosine Count
1329653 bp
Genome Length
6446463 bp
Protein-coding Genes
5624 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine transporter lyse | C9J12_04480 | Not Available | + | 1000793 - 1001401 | 22070.8 |
| c4-dicarboxylate abc transporter | C9J12_04485 | Not Available | + | 1001607 - 1002920 | 46441.6 |
| mfs transporter | C9J12_04490 | Not Available | + | 1003397 - 1004563 | 40989.5 |
| dimethylsulfoxide reductase | C9J12_04495 | Not Available | - | 1004663 - 1005508 | 30600.7 |
| dimethylsulfoxide reductase, chain b | C9J12_04500 | Not Available | - | 1005510 - 1006124 | 22700.9 |
| dimethyl sulfoxide reductase subunit a | C9J12_04505 | Not Available | - | 1006135 - 1008579 | 89921.0 |
| dmso reductase | C9J12_04510 | Not Available | + | 1008943 - 1009527 | 22112.4 |
| ferredoxin-type protein napf | C9J12_04515 | Not Available | + | 1009527 - 1010084 | 20134.1 |
| stas/sec14 domain-containing protein | C9J12_04520 | Not Available | + | 1010233 - 1010610 | 14330.0 |
| hypothetical protein | C9J12_04525 | Not Available | + | 1010793 - 1011533 | 26284.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.