Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium frigidiphilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium frigidiphilum
Accession NumberPYMJ00000000.1
Gene Summary
Adenine Count
1873058 bp
Thymine Count
1890150 bp
Guanine Count
1353602 bp
Cytosine Count
1329653 bp
Genome Length
6446463 bp
Protein-coding Genes
5624 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhombosortase | C9J12_03160 | Not Available | - | 698754 - 699296 | 19840.3 |
| dtw domain-containing protein | C9J12_03165 | Not Available | + | 699342 - 699995 | 24561.3 |
| dgtpase | C9J12_03170 | Not Available | - | 700084 - 701451 | 51948.7 |
| 5'-deoxynucleotidase | C9J12_03175 | Not Available | - | 701451 - 702035 | 22319.7 |
| aminotransferase | C9J12_03180 | Not Available | - | 702261 - 703475 | 45506.1 |
| isochorismate synthase | C9J12_03185 | Not Available | + | 704001 - 705413 | 52927.0 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | C9J12_03190 | Not Available | + | 705410 - 707140 | 62955.8 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | C9J12_03195 | Not Available | + | 707124 - 707954 | 30710.2 |
| o-succinylbenzoate synthase | C9J12_03200 | Not Available | + | 707980 - 708954 | 35896.5 |
| o-succinylbenzoate--coa ligase | C9J12_03205 | Not Available | + | 708942 - 710378 | 53018.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.