Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium frigidiphilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium frigidiphilum
Accession NumberPYMJ00000000.1
Gene Summary
Adenine Count
1873058 bp
Thymine Count
1890150 bp
Guanine Count
1353602 bp
Cytosine Count
1329653 bp
Genome Length
6446463 bp
Protein-coding Genes
5624 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | C9J12_03010 | Not Available | - | 662084 - 664078 | 73970.1 |
| beta-ketoacyl-[acyl-carrier-protein] synthase i | C9J12_03015 | Not Available | + | 664304 - 665518 | 42645.7 |
| udp-glucose 6-dehydrogenase | C9J12_03020 | Not Available | + | 665946 - 667112 | 43305.6 |
| 4-phosphoerythronate dehydrogenase | C9J12_03025 | Not Available | + | 667173 - 668348 | 42815.6 |
| aspartate-semialdehyde dehydrogenase | C9J12_03030 | Not Available | + | 668345 - 669358 | 37222.0 |
| hypothetical protein | C9J12_03035 | Not Available | + | 669593 - 673792 | 153841.0 |
| trna pseudouridine(38-40) synthase trua | C9J12_03040 | Not Available | + | 673914 - 674699 | 29381.0 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | C9J12_03045 | Not Available | + | 674842 - 675765 | 33884.2 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | C9J12_03050 | Not Available | + | 675987 - 677252 | 45332.9 |
| cell division protein dedd | C9J12_03055 | Not Available | + | 677330 - 677917 | 21449.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.