Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium frigidiphilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium frigidiphilum
Accession NumberPYMJ00000000.1
Gene Summary
Adenine Count
1873058 bp
Thymine Count
1890150 bp
Guanine Count
1353602 bp
Cytosine Count
1329653 bp
Genome Length
6446463 bp
Protein-coding Genes
5624 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-deoxy-d-gluconate 3-dehydrogenase | C9J12_28530 | Not Available | - | 6162042 - 6162797 | 26769.1 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | C9J12_28535 | Not Available | - | 6162893 - 6163723 | 31102.2 |
| n-acetylglucosamine-6-phosphate deacetylase | C9J12_28540 | Not Available | - | 6163775 - 6164926 | 41146.2 |
| pts mannose transporter subunit iia | C9J12_28545 | Not Available | - | 6164929 - 6165372 | 15828.2 |
| pts n-acetylgalactosamine transporter subunit iid | C9J12_28550 | Not Available | - | 6165431 - 6166324 | 32190.9 |
| pts n-acetylgalactosamine transporter subunit iic | C9J12_28555 | Not Available | - | 6166314 - 6166416 | 3438.87 |
| integrase | C9J12_28560 | Not Available | + | 6166508 - 6167908 | 54062.9 |
| hypothetical protein | C9J12_28565 | Not Available | + | 6167910 - 6170264 | 87894.9 |
| integrase | C9J12_28570 | Not Available | + | 6170278 - 6172482 | 84271.7 |
| bacterioferritin comigratory protein | C9J12_28575 | Not Available | + | 6172479 - 6172964 | 18433.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.