Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium frigidiphilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium frigidiphilum
Accession NumberPYMJ00000000.1
Gene Summary
Adenine Count
1873058 bp
Thymine Count
1890150 bp
Guanine Count
1353602 bp
Cytosine Count
1329653 bp
Genome Length
6446463 bp
Protein-coding Genes
5624 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc ribbon-containing protein | C9J12_27480 | Not Available | - | 5956396 - 5956878 | 18476.7 |
| leucine--trna ligase | C9J12_27485 | Not Available | + | 5957066 - 5959642 | 97130.3 |
| hypothetical protein | C9J12_27490 | Not Available | + | 5959810 - 5960523 | 26671.6 |
| dna polymerase iii subunit delta | C9J12_27495 | Not Available | + | 5960520 - 5961551 | 39523.0 |
| ribosome silencing factor | C9J12_27500 | Not Available | + | 5961773 - 5962090 | 11800.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C9J12_27505 | Not Available | + | 5962097 - 5962567 | 17401.2 |
| penicillin-binding protein 2 | C9J12_27510 | Not Available | + | 5962574 - 5964517 | 73326.5 |
| rod shape-determining protein roda | C9J12_27515 | Not Available | + | 5964514 - 5965635 | 40715.6 |
| septal ring lytic transglycosylase rlpa | C9J12_27520 | Not Available | + | 5965636 - 5966541 | 33741.9 |
| d-alanyl-d-alanine carboxypeptidase | C9J12_27525 | Not Available | + | 5966703 - 5967878 | 42883.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.