Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium frigidiphilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium frigidiphilum
Accession NumberPYMJ00000000.1
Gene Summary
Adenine Count
1873058 bp
Thymine Count
1890150 bp
Guanine Count
1353602 bp
Cytosine Count
1329653 bp
Genome Length
6446463 bp
Protein-coding Genes
5624 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| betaine-aldehyde dehydrogenase | C9J12_27170 | Not Available | + | 5904937 - 5906397 | 52383.2 |
| choline dehydrogenase | C9J12_27175 | Not Available | + | 5906497 - 5908191 | 62009.1 |
| glycine/betaine abc transporter substrate-binding protein | C9J12_27180 | Not Available | + | 5908348 - 5909298 | 34833.1 |
| choline abc transporter permease subunit | C9J12_27185 | Not Available | + | 5909427 - 5910275 | 30908.2 |
| choline abc transporter atp-binding protein | C9J12_27190 | Not Available | + | 5910278 - 5911480 | 44183.1 |
| carnitine acyltransferase | C9J12_27195 | Not Available | + | 5911743 - 5913482 | 65470.1 |
| duf4440 domain-containing protein | C9J12_27200 | Not Available | - | 5913668 - 5914096 | 15817.0 |
| transcriptional regulator | C9J12_27205 | Not Available | + | 5914256 - 5914603 | 13169.0 |
| c4-dicarboxylate abc transporter | C9J12_27210 | Not Available | + | 5915073 - 5916461 | 49220.0 |
| hypothetical protein | C9J12_27215 | Not Available | - | 5916733 - 5917062 | 12694.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.