Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium frigidiphilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium frigidiphilum
Accession NumberPYMJ00000000.1
Gene Summary
Adenine Count
1873058 bp
Thymine Count
1890150 bp
Guanine Count
1353602 bp
Cytosine Count
1329653 bp
Genome Length
6446463 bp
Protein-coding Genes
5624 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine 4-monooxygenase | C9J12_26735 | Not Available | + | 5827027 - 5827839 | 31501.9 |
| 4a-hydroxytetrahydrobiopterin dehydratase | C9J12_26740 | Not Available | + | 5827832 - 5828170 | 13024.5 |
| valyl-trna synthetase | C9J12_26745 | Not Available | + | 5828289 - 5828373 | 3111.83 |
| conjugative transfer relaxase/helicase trai | C9J12_26750 | Not Available | - | 5828374 - 5829823 | 53418.3 |
| hypothetical protein | C9J12_26760 | Not Available | - | 5831163 - 5831585 | 15903.1 |
| type iv conjugative transfer system coupling protein trad | C9J12_26770 | Not Available | - | 5832468 - 5834549 | 79667.1 |
| hypothetical protein | C9J12_26775 | Not Available | - | 5834546 - 5834917 | 13380.3 |
| hypothetical protein | C9J12_26780 | Not Available | + | 5835030 - 5835470 | 15738.0 |
| tn3 family transposase | C9J12_26790 | Not Available | - | 5836342 - 5839344 | 113182.0 |
| transcriptional regulator merd | C9J12_26795 | Not Available | - | 5839673 - 5840050 | 13992.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.