Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium frigidiphilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium frigidiphilum
Accession NumberPYMJ00000000.1
Gene Summary
Adenine Count
1873058 bp
Thymine Count
1890150 bp
Guanine Count
1353602 bp
Cytosine Count
1329653 bp
Genome Length
6446463 bp
Protein-coding Genes
5624 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpos | C9J12_25320 | Not Available | - | 5534451 - 5535326 | 33418.0 |
| hypothetical protein | C9J12_25325 | Not Available | + | 5535530 - 5535853 | 12042.5 |
| cupin domain-containing protein | C9J12_25330 | Not Available | - | 5535910 - 5536311 | 14666.8 |
| qnr family pentapeptide repeat protein | C9J12_25335 | Not Available | - | 5536486 - 5537142 | 24845.0 |
| txe/yoeb family addiction module toxin | C9J12_25345 | Not Available | - | 5537670 - 5537933 | 10263.5 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | C9J12_25350 | Not Available | - | 5537926 - 5538198 | 10596.3 |
| hypothetical protein | C9J12_25355 | Not Available | - | 5538851 - 5539033 | 6768.16 |
| is5/is1182 family transposase | C9J12_25360 | Not Available | - | 5539056 - 5540036 | 37885.3 |
| s-adenosylhomocysteine hydrolase | C9J12_25365 | Not Available | + | 5540433 - 5540837 | 15570.0 |
| pyrophosphatase | C9J12_25370 | Not Available | + | 5540834 - 5541775 | 36271.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.