Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium frigidiphilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium frigidiphilum
Accession NumberPYMJ00000000.1
Gene Summary
Adenine Count
1873058 bp
Thymine Count
1890150 bp
Guanine Count
1353602 bp
Cytosine Count
1329653 bp
Genome Length
6446463 bp
Protein-coding Genes
5624 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase | C9J12_23955 | Not Available | + | 5230129 - 5230746 | 22115.3 |
| formate dehydrogenase subunit gamma | C9J12_23960 | Not Available | + | 5230890 - 5231966 | 40473.5 |
| nad-dependent protein deacylase | C9J12_23965 | Not Available | + | 5232371 - 5233087 | 26302.1 |
| spermidine/putrescine abc transporter substrate-binding protein potd | C9J12_23970 | Not Available | - | 5233184 - 5234227 | 39308.8 |
| spermidine/putrescine abc transporter substrate-binding protein potd | C9J12_23975 | Not Available | - | 5234473 - 5235504 | 38646.9 |
| spermidine/putrescine abc transporter permease potc | C9J12_23980 | Not Available | - | 5235618 - 5236388 | 28260.7 |
| spermidine/putrescine abc transporter permease potb | C9J12_23985 | Not Available | - | 5236388 - 5237245 | 32425.1 |
| spermidine/putrescine abc transporter atp-binding protein pota | C9J12_23990 | Not Available | - | 5237229 - 5238347 | 41787.2 |
| hypothetical protein | C9J12_23995 | Not Available | + | 5238790 - 5239773 | 35652.6 |
| glucosaminidase | C9J12_24000 | Not Available | + | 5239773 - 5240540 | 28520.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.