Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium frigidiphilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium frigidiphilum
Accession NumberPYMJ00000000.1
Gene Summary
Adenine Count
1873058 bp
Thymine Count
1890150 bp
Guanine Count
1353602 bp
Cytosine Count
1329653 bp
Genome Length
6446463 bp
Protein-coding Genes
5624 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9J12_00545 | Not Available | - | 124690 - 125148 | 16715.2 |
| leucyl/phenylalanyl-trna--protein transferase | C9J12_00550 | Not Available | + | 125228 - 125941 | 26905.2 |
| arginyltransferase | C9J12_00555 | Not Available | + | 125950 - 126639 | 26892.1 |
| translation initiation factor if-1 | C9J12_00560 | Not Available | + | 126859 - 127077 | 8220.07 |
| atp-dependent clp protease atp-binding subunit clpa | C9J12_00565 | Not Available | - | 127241 - 129511 | 83962.5 |
| atp-dependent clp protease adaptor clps | C9J12_00570 | Not Available | - | 129557 - 129877 | 12247.9 |
| cold shock domain protein cspd | C9J12_00575 | Not Available | + | 130103 - 130324 | 8032.43 |
| nadp-dependent isocitrate dehydrogenase | C9J12_00580 | Not Available | - | 130861 - 132114 | 45776.9 |
| 23s rrna pseudouridylate synthase | C9J12_00585 | Not Available | + | 132255 - 132905 | 24965.1 |
| trna 2-thiouridine(34) synthase mnma | C9J12_00590 | Not Available | + | 133259 - 134386 | 42296.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.