Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium frigidiphilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium frigidiphilum
Accession NumberPYMJ00000000.1
Gene Summary
Adenine Count
1873058 bp
Thymine Count
1890150 bp
Guanine Count
1353602 bp
Cytosine Count
1329653 bp
Genome Length
6446463 bp
Protein-coding Genes
5624 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | C9J12_06965 | Not Available | - | 1534719 - 1535183 | 17303.8 |
| two-component system sensor histidine kinase cpxa | C9J12_06970 | Not Available | - | 1535270 - 1536637 | 52104.7 |
| dna-binding response regulator | C9J12_06975 | Not Available | - | 1536637 - 1537332 | 26185.2 |
| stress adaptor protein cpxp | C9J12_06980 | Not Available | + | 1537535 - 1538017 | 18137.0 |
| 6-phosphofructokinase | C9J12_06985 | Not Available | + | 1538402 - 1539364 | 34726.0 |
| triose-phosphate isomerase | C9J12_06990 | Not Available | - | 1539566 - 1540336 | 26838.8 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | C9J12_06995 | Not Available | + | 1540686 - 1541033 | 13164.6 |
| duf3135 domain-containing protein | C9J12_07000 | Not Available | - | 1541030 - 1541356 | 12278.7 |
| ferredoxin--nadp(+) reductase | C9J12_07005 | Not Available | - | 1541543 - 1542301 | 28305.1 |
| transcriptional regulator | C9J12_07010 | Not Available | - | 1542319 - 1542939 | 23804.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.