Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium frigidiphilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium frigidiphilum
Accession NumberPYMJ00000000.1
Gene Summary
Adenine Count
1873058 bp
Thymine Count
1890150 bp
Guanine Count
1353602 bp
Cytosine Count
1329653 bp
Genome Length
6446463 bp
Protein-coding Genes
5624 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adp-heptose--lps heptosyltransferase i | C9J12_06865 | Not Available | - | 1514720 - 1515772 | 38502.3 |
| 3-deoxy-d-manno-octulosonic acid kinase | C9J12_06870 | Not Available | + | 1515865 - 1516575 | 26958.2 |
| 3-deoxy-d-manno-octulosonic acid transferase | C9J12_06875 | Not Available | - | 1516554 - 1517843 | 47314.4 |
| cdp-glycerol--glycerophosphate glycerophosphotransferase | C9J12_06880 | Not Available | + | 1518018 - 1519073 | 39398.0 |
| hypothetical protein | C9J12_06885 | Not Available | + | 1519244 - 1520179 | 36568.7 |
| glycosyl transferase | C9J12_06890 | Not Available | + | 1520201 - 1520968 | 28582.3 |
| glycosyltransferase | C9J12_06895 | Not Available | - | 1521002 - 1521745 | 28819.4 |
| glycosyl transferase family 1 | C9J12_06900 | Not Available | - | 1521774 - 1522856 | 39778.6 |
| epitope biosynthesis protein | C9J12_06905 | Not Available | - | 1522861 - 1523610 | 29279.3 |
| ligase | C9J12_06910 | Not Available | - | 1523612 - 1524793 | 44165.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.