Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium frigidiphilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium frigidiphilum
Accession NumberPYMJ00000000.1
Gene Summary
Adenine Count
1873058 bp
Thymine Count
1890150 bp
Guanine Count
1353602 bp
Cytosine Count
1329653 bp
Genome Length
6446463 bp
Protein-coding Genes
5624 genes
Non-Coding Genes
222 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | C9J12_06700 | Not Available | - | 1481425 - 1482873 | 51977.6 |
| reactive intermediate/imine deaminase | C9J12_06705 | Not Available | - | 1482969 - 1483361 | 14071.9 |
| lysr family transcriptional regulator | C9J12_06710 | Not Available | + | 1483529 - 1484431 | 32625.9 |
| transcription elongation factor greb | C9J12_06715 | Not Available | - | 1484571 - 1485041 | 18631.2 |
| two-component system response regulator ompr | C9J12_06720 | Not Available | + | 1485338 - 1486057 | 27406.3 |
| two-component system sensor histidine kinase envz | C9J12_06725 | Not Available | + | 1486061 - 1487392 | 49579.8 |
| xanthine permease xanp | C9J12_06730 | Not Available | - | 1487468 - 1488847 | 48315.2 |
| atp-dependent dna helicase recg | C9J12_06735 | Not Available | - | 1489282 - 1491375 | 77006.4 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | C9J12_06740 | Not Available | - | 1491400 - 1492104 | 26136.5 |
| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | C9J12_06745 | Not Available | - | 1492216 - 1494327 | 79354.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.