Pseudomonas syringae pv. spinaceae

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. spinaceae is a Gram-negative, rod-shaped bacterium that exists primarily as single cells and is classified as a heterotrophic aerobe. This microbe is known to inhabit a variety of environments, reflecting its versatile ecological adaptability. Its aerobic nature indicates that it thrives in oxygen-rich conditions, which is consistent with the metabolic requirements of many heterotrophic organisms that utilize organic compounds as energy sources. The broad habitat range of Pseudomonas syringae pv. spinaceae allows it to exploit various substrates, potentially contributing to its role in nutrient cycling within diverse ecosystems. The organism's ability to survive in multiple habitats underscores its ecological significance, as it may interact with other microbial communities and contribute to the overall dynamics of soil and plant health. This adaptability not only highlights the ecological versatility of Pseudomonas syringae pv. spinaceae but also suggests its potential role in biogeochemical processes. The presence of this bacterium in different environments may influence organic matter decomposition and nutrient availability, thereby impacting plant growth and ecosystem functionality.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. spinaceae
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. spinaceae

Accession NumberLJRI00000000.1

Gene Summary

Adenine Count

1258138 bp

Thymine Count

1259709 bp

Guanine Count

1762019 bp

Cytosine Count

1758105 bp

Genome Length

6038703 bp

Protein-coding Genes

6454 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail protein iALO94_00673P26701-275915 - 27647820914.1
Baseplate assembly proteinALO94_00674P51767-276480 - 27736131786.7
Baseplate assembly proteinALO94_00675Not Available-277358 - 27768412052.7
uncharacterized proteinALO94_00676Not Available-277688 - 2779669704.51
Baseplate assembly protein vALO94_00677Not Available-278009 - 27859320175.5
Putative minor tail proteinALO94_00678Not Available-278593 - 27912019634.0
Hypothetical proteinALO94_00679Not Available-279113 - 27976924444.2
uncharacterized proteinALO94_00680Not Available-279766 - 28008011368.8
Major capsid proteinALO94_00681Not Available-280083 - 28107836089.0
Portal proteinALO94_03022P51717+483687 - 48470637907.1

Displaying genes 1 – 10 of 6559 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

318 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 318 metabolites