Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Idiomarinaceae
Genus
Idiomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Idiomarinaceae |
| Genus | Idiomarina |
| Species | Idiomarina ramblicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Rambla Salada |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Idiomarina ramblicola str. R22
Accession NumberPIQC00000000.1
Gene Summary
Adenine Count
720849 bp
Thymine Count
718670 bp
Guanine Count
620650 bp
Cytosine Count
652191 bp
Genome Length
2712360 bp
Protein-coding Genes
2512 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | CWI78_01485 | Not Available | + | 309216 - 310346 | 41314.7 |
| d-alanyl-d-alanine carboxypeptidase | CWI78_01490 | Not Available | + | 310340 - 311047 | 26653.4 |
| duf2897 domain-containing protein | CWI78_01495 | Not Available | + | 311020 - 311178 | 6016.39 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | CWI78_01500 | Not Available | - | 311175 - 311888 | 27150.5 |
| hypothetical protein | CWI78_01505 | Not Available | - | 311912 - 313000 | 40624.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CWI78_01510 | Not Available | - | 313000 - 313890 | 31939.1 |
| thioredoxin-dependent thiol peroxidase | CWI78_01515 | Not Available | + | 314069 - 314539 | 17830.1 |
| ai-2e family transporter | CWI78_01520 | Not Available | - | 314559 - 315638 | 39951.6 |
| peptidase m48 | CWI78_01525 | Not Available | + | 315784 - 317235 | 54214.0 |
| tlpa family protein disulfide reductase | CWI78_01530 | Not Available | - | 317227 - 317676 | 16672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.