Microbulbifer agarilyticus str. GP101

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Microbulbiferaceae

Genus

Microbulbifer

Description

Microbulbifer agarilyticus strain GP101 is a Gram-negative, rod-shaped bacterium that exhibits facultative aerobe/anaerobe characteristics, thriving optimally at a temperature of 32.0 °C. This organism’s Gram-negative status indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, which may influence its interactions with the environment and other microorganisms. The rod shape of M. agarilyticus suggests a possible adaptation to various ecological niches, facilitating motility and nutrient acquisition. As a facultative aerobe/anaerobe, M. agarilyticus has the metabolic flexibility to utilize oxygen when available, but can also switch to anaerobic respiration in its absence. This trait may confer an advantage in fluctuating environmental conditions, allowing it to survive in diverse habitats where oxygen levels can vary. Such metabolic versatility may also indicate a role in biogeochemical cycles, particularly in the breakdown of organic materials under differing oxygen conditions. Overall, the characteristics of Microbulbifer agarilyticus str. GP101 suggest its potential involvement in the degradation of complex organic substrates, which could have implications for nutrient cycling and energy flow in its native ecosystem. Further studies may elucidate its specific contributions to these processes and its interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyMicrobulbiferaceae
GenusMicrobulbifer
SpeciesMicrobulbifer agarilyticus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbulbifer agarilyticus str. GP101

Accession NumberNZ_CP019650.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3456 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
zn-dependent hydrolaseMag101_RS00160Not Available-37868 - 3910644772.1
lysr substrate-binding domain-containing proteinMag101_RS00165Not Available+39269 - 4023135491.6
aldehyde dehydrogenase family proteinMag101_RS00170Not Available+40461 - 4188851168.9
apc family permeaseMag101_RS00175Not Available+41942 - 4334550815.1
tonb-dependent receptorMag101_RS00180Not Available+43546 - 4587383380.8
nad(p)/fad-dependent oxidoreductaseMag101_RS00185Not Available+45912 - 4732752601.8
helix-turn-helix transcriptional regulatorMag101_RS00190Not Available-47415 - 4825431647.4
gamma carbonic anhydrase family proteinMag101_RS00195Not Available-48285 - 4885420317.3
m3 family metallopeptidaseMag101_RS00200Not Available+48957 - 5100575968.8
yhev family putative zinc ribbon proteinMag101_RS00205Not Available+51053 - 512898975.87

Displaying genes 71 – 80 of 3544 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites