Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas amygdali pv. photiniae
Accession NumberRBSP00000000.1
Gene Summary
Adenine Count
1232001 bp
Thymine Count
1230837 bp
Guanine Count
1707956 bp
Cytosine Count
1702052 bp
Genome Length
5981716 bp
Protein-coding Genes
5770 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer-membrane protein of hrp secretion pathway | ALP66_05157 | Not Available | + | 5761279 - 5763402 | 77408.6 |
| hrpt | ALP66_02768 | Not Available | + | 5763399 - 5763602 | 7475.96 |
| type iii negative regulator of hrp expression hrpv | ALP66_02769 | Not Available | + | 5763605 - 5763952 | 13360.9 |
| hypothetical protein | ALP66_02770 | Not Available | + | 5764319 - 5764786 | 17772.8 |
| type iii secretion component protein hrcu | ALP66_02771 | Not Available | - | 5765032 - 5766111 | 39995.5 |
| type iii secretion protein spar/ysct/hrct | ALP66_02772 | Not Available | - | 5766108 - 5766560 | 16160.5 |
| type iii secretion component protein hrcs | ALP66_02773 | Not Available | - | 5766907 - 5767173 | 9407.06 |
| type iii secretion system inner membrane protein | ALP66_02774 | Not Available | - | 5767181 - 5767834 | 24153.6 |
| type iii secretion component protein hrcqb | ALP66_02775 | Not Available | - | 5767831 - 5768217 | 14166.2 |
| type iii secretion protein hrcqa | ALP66_02776 | Not Available | - | 5768207 - 5768923 | 25999.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
