Gloeobacter violaceus PCC 7421

Gram-negativeRodNon-motile

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Gloeobacterales

Family

Gloeobacteraceae

Genus

Gloeobacter

Description

Gloeobacter violaceus PCC 7421 is a unicellular cyanobacterium. Cyanobacteria are aquatic and photosynthetic (which results in them being labelled blue-green algae) they live in the water, and can manufacture their own food, they are quite small and usually unicellular, though they often grow in colonies large enough to be visible with the human eye.Gloeobacter violaceus performs photosynthesis in a different part of the cell than other cyanobacteria.Comparison of the assigned gene components with those of other cyanobacteria has unveiled distinctive features of the G. violaceus genome. Genes for PsaI, PsaJ, PsaK, and PsaX for Photosystem I and PsbY, PsbZ and Psb27 for Photosystem II were missing, and those for PsaF, PsbO, PsbU, and PsbV were poorly conserved. cpcG for a rod core linker peptide for phycobilisomes and nblA related to the degradation of phycobilisomes were also missing. Potential signal peptides of the presumptive products of petJ and petE for soluble electron transfer catalysts were less conserved than the remaining portions. These observations may be related to the fact that photosynthesis in G. violaceus takes place not in thylakoid membranes but in the cytoplasmic membrane.A large number of genes for sigma factors and transcription factors in the LuxR, LysR, PadR, TetR, and MarR families could be identified, while those for major elements for circadian clock, kaiABC were not found.The sequenced strain PCC 7421 was found in rock in Switzerland.Phylogenetic analysis using multiple criteria strongly suggest that this strain is a member of early branching lineage. (From http://www.ebi.ac.uk/2can/genomes/bacteria.html) (BacMap)

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderGloeobacterales
FamilyGloeobacteraceae
GenusGloeobacter
SpeciesGloeobacter violaceus
StrainPCC 7421

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Gloeobacter violaceus PCC 7421
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourcePhotoautotroph - Photosynthetic
PathogenicityNo

Genome Summary

Gloeobacter violaceus PCC 7421

Accession NumberNC_005125.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinGLL_RS00700Not Available+131296 - 13209028840.8
hypothetical proteinGLL_RS00705Not Available+132087 - 13319039471.6
bax inhibitor-1 family proteinGLL_RS00710Not Available-133435 - 13411824279.9
exodeoxyribonuclease iiiGLL_RS00715Not Available+134219 - 13499528770.2
hypothetical proteinGLL_RS00720Not Available-135008 - 1351816284.95
nuclear transport factor 2 family proteinGLL_RS00725Not Available-135303 - 13568914027.8
transcriptional regulator nrdrGLL_RS00730Not Available-135699 - 13621719781.7
hypothetical proteinGLL_RS00735Not Available-136227 - 13666716391.8
hypothetical proteinGLL_RS00740Not Available-136652 - 1368889077.3
is4-like element isgvi2 family transposaseGLL_RS00745Not Available+137192 - 13859552244.6

Displaying genes 141 – 150 of 4604 in total

Pathways

23 pathways

Metabolites

162 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da

Displaying 1–10 of 162 metabolites