Flavobacterium psychrolimnae str. LMG 22018

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium psychrolimnae str. LMG 22018 is a Gram-negative, rod-shaped bacterium that thrives in the cold temperatures of its Antarctic habitat, with an optimal growth temperature of 16.0 °C. This psychrophilic microorganism is adapted to survive and proliferate in extreme cold environments, which typically exert selective pressure on metabolic and physiological processes. The rod morphology of F. psychrolimnae suggests structural adaptations that may enhance its survival in low-temperature niches, potentially influencing its nutrient uptake and cellular functions. The psychrophilic nature of this strain points to unique biochemical pathways that facilitate cellular activity at lower temperatures, which could include the production of cold-adapted enzymes that remain functional and efficient under such conditions. The ecological role of Flavobacterium psychrolimnae str. LMG 22018 within the Antarctic ecosystem may involve the degradation of organic matter, thereby contributing to nutrient cycling in this harsh environment. Its presence highlights the importance of microbial life in extreme climates, particularly in maintaining ecosystem balance and supporting food webs in regions where temperatures are consistently low. Understanding the adaptations of this bacterium could provide insights into microbial resilience and function in polar ecosystems, shedding light on the broader implications of climate change on microbial communities in similar habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium psychrolimnae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature16
Temperature rangepsychrotolerant
HabitatAntarctic
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium psychrolimnae str. LMG 22018

Accession NumberQNUX00000000.1

Gene Summary

Adenine Count

1212267 bp

Thymine Count

1191086 bp

Guanine Count

615038 bp

Cytosine Count

633650 bp

Genome Length

3652041 bp

Protein-coding Genes

3152 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaDR980_15990Not Available-3589411 - 359040937668.3
cytidine deaminaseDR980_15995Not Available-3590552 - 359103417823.6
hypothetical proteinDR980_16000Not Available-3591120 - 359228943135.3
peptidase c25DR980_16005Not Available-3592328 - 3596164142888.0
gliding motility lipoprotein gldjDR980_16010Not Available+3596374 - 359805963812.1
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseDR980_16015Not Available+3598126 - 359941247994.2
hypothetical proteinDR980_16020Not Available-3599733 - 360035023163.9
nudix hydrolaseDR980_16025Not Available+3600630 - 360138528545.6
dna-binding response regulatorDR980_16030Not Available+3602109 - 360278625441.2
sensor histidine kinaseDR980_16035Not Available+3602755 - 360404449742.2

Displaying genes 3151 – 3160 of 3200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites