Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia farcinica |
| Strain | IFM 10152 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Filaments |
| Sporulation | Sporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Yes |
Genome Summary
Nocardia farcinica IFM 10152
Accession NumberNC_006362.1
Gene Summary
Adenine Count
29964 bp
Thymine Count
30482 bp
Guanine Count
62304 bp
Cytosine Count
61276 bp
Genome Length
184026 bp
Protein-coding Genes
181 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | NFA_RS01130 | Not Available | + | 235854 - 236348 | 18377.9 |
| Trna-ser | Not Available | Not Available | + | 236369 - 236453 | Not Available |
| hoxn/hupn/nixa family nickel/cobalt transporter | NFA_RS01140 | Not Available | + | 236544 - 237590 | 38053.9 |
| protein phosphatase 2c domain-containing protein | NFA_RS01145 | Not Available | + | 237566 - 238399 | 29909.5 |
| gnat family n-acetyltransferase | NFA_RS01150 | Not Available | - | 238494 - 239282 | 27805.6 |
| Trna-arg | Not Available | Not Available | + | 239474 - 239546 | Not Available |
| Trna-ser | Not Available | Not Available | + | 239581 - 239670 | Not Available |
| dienelactone hydrolase family protein | NFA_RS01165 | Not Available | - | 239762 - 240469 | 25327.2 |
| histidinol-phosphate transaminase | NFA_RS01170 | Not Available | + | 240598 - 241674 | 38535.9 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | NFA_RS01175 | Not Available | - | 241779 - 242507 | 25881.4 |
Pathways
753 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Lysine Biosynthesis
Lysine Biosynthesis
Taurine Metabolism
Taurine Metabolism
TCA Cycle
TCA Cycle
Glycolysis and Pyruvate Dehydrogenase
Glycolysis and Pyruvate Dehydrogenase
Arginine Metabolism
Arginine Metabolism
Ornithine Metabolism
Ornithine Metabolism