Klebsiella variicola str. 342

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella variicola str. 342 is a Gram-negative, rod-shaped bacterium characterized by its ability to form chains, pairs, and single cells. This strain is nonsporulating and exhibits facultative anaerobic metabolism, enabling it to thrive in both aerobic and anaerobic environments. The optimal growth temperature for K. variicola str. 342 is approximately 37.0°C, which aligns with the physiological temperature of many host organisms, suggesting a potential adaptation to a host-associated habitat. Klebsiella variicola, as a member of the Klebsiella genus, is known to inhabit diverse environments, often in association with various plants and animals. The facultative anaerobic nature of this strain may provide advantages in fluctuating oxygen levels within host-associated environments, allowing it to colonize and persist in different niches. The capacity to grow in pairs and chains may also influence its interactions within microbial communities, potentially facilitating cooperative behaviors or biofilm formation. Overall, the traits of K. variicola str. 342 highlight its adaptability to host-associated environments, which may play a significant role in its ecological dynamics and interactions with other microorganisms, as well as its potential functional contributions to the microbiome of the host it associates with.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella variicola
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Klebsiella variicola str. 342
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Klebsiella variicola str. 342

Accession NumberNC_011283.1

Gene Summary

Adenine Count

1203247 bp

Thymine Count

1206346 bp

Guanine Count

1612759 bp

Cytosine Count

1618887 bp

Genome Length

5641239 bp

Protein-coding Genes

5211 genes

Non-Coding Genes

283 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+2879820 - 2879831Not Available
Integrase/recombinase, putativeKPK_RS28815Not Available+2881862 - 288286037617.4
tyrosine-type recombinase/integraseKPK_RS31600Not Available+2882857 - 288506784728.9
hypothetical proteinKPK_RS13520Not Available-2885160 - 288567819322.8
wyl domain-containing proteinKPK_RS13525Not Available-2885691 - 288654533209.7
hypothetical proteinKPK_RS13530Not Available+2886682 - 288786343980.4
thif family adenylyltransferaseKPK_RS13535Not Available+2887860 - 289008883102.3
Error-prone lesion bypass dna polymerase vKPK_RS28825Not Available-2890133 - 28902614752.67
Errror-prone repair protein umudKPK_RS13540Not Available-2890263 - 289068215153.2
Dna invertase-like proteinKPK_RS13545Not Available-2890945 - 28911788588.49

Displaying genes 1 – 10 of 5494 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

323 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da

Displaying 1–10 of 323 metabolites