Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YE71 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YE71
Accession NumberFPIR00000000.1
Gene Summary
Adenine Count
994685 bp
Thymine Count
995844 bp
Guanine Count
1036521 bp
Cytosine Count
1043282 bp
Genome Length
4073443 bp
Protein-coding Genes
3566 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910447_03473 | Not Available | + | 3894138 - 3894368 | 8522.13 |
| predicted metalloendopeptidase | SAMN02910447_03474 | Not Available | + | 3894535 - 3896550 | 75293.2 |
| ftsx-like permease family protein | SAMN02910447_03475 | Not Available | + | 3896553 - 3899003 | 88597.2 |
| putative abc transport system atp-binding protein | SAMN02910447_03476 | Not Available | + | 3899020 - 3899688 | 24298.4 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02910447_03477 | Not Available | + | 3899717 - 3900391 | 25293.8 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN02910447_03478 | Not Available | + | 3900381 - 3901316 | 34992.4 |
| nad-dependent protein deacetylase, sir2 family | SAMN02910447_03479 | Not Available | - | 3901449 - 3902297 | 32939.7 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN02910447_03480 | Not Available | - | 3902263 - 3903027 | 28618.2 |
| protein of unknown function | SAMN02910447_03481 | Not Available | - | 3903040 - 3903625 | 22009.1 |
| pectate lyase | SAMN02910447_03482 | Not Available | - | 3903673 - 3907005 | 118415.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
