Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | N16961 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | CurvedShaped |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Yes |
Genome Summary
Vibrio cholerae O1 biovar El Tor str. N16961
Accession NumberNC_002505.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system secretin gspd | VC_RS01260 | Not Available | + | 263548 - 264219 | 25493.1 |
| glycosyltransferase family 4 protein | VC_RS01265 | Not Available | - | 264254 - 265366 | 41903.4 |
| polysaccharide biosynthesis protein | VC_RS01270 | Not Available | - | 265374 - 267239 | 69235.0 |
| udp-glucose 4-epimerase family protein | VC_RS01275 | Not Available | + | 267392 - 268363 | 35690.2 |
| sugar transferase | VC_RS01280 | Not Available | + | 268371 - 268925 | 20509.6 |
| mbl fold metallo-hydrolase rna specificity domain-containing protein | VC_RS01285 | Not Available | + | 269119 - 270435 | 48555.5 |
| mechanosensitive ion channel family protein | VC_RS01290 | Not Available | - | 270697 - 271935 | 46769.4 |
| uracil-dna glycosylase family protein | VC_RS01295 | Not Available | - | 271990 - 272562 | 21765.4 |
| d-2-hydroxyacid dehydrogenase | VC_RS01300 | Not Available | - | 272562 - 273485 | 34946.9 |
| yjag family protein | VC_RS01305 | Not Available | + | 273559 - 274146 | 22585.9 |
Pathways
1313 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Lipoic Acid Metabolism
Lipoic Acid Metabolism
Lysine Biosynthesis
Lysine Biosynthesis
Taurine Metabolism
Taurine Metabolism
Glycolysis and Pyruvate Dehydrogenase
Glycolysis and Pyruvate Dehydrogenase
Arginine Metabolism
Arginine Metabolism
Ornithine Metabolism
Ornithine Metabolism


