Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | TPANIC_RS04755 | Not Available | - | 1048161 - 1049123 | 35355.1 |
| hypothetical protein | TPANIC_RS04760 | Not Available | - | 1049148 - 1050782 | 60151.2 |
| hypothetical protein | TPANIC_RS04765 | Not Available | - | 1050829 - 1052382 | 56600.5 |
| hypothetical protein | TPANIC_RS04770 | Not Available | - | 1052379 - 1054001 | 60066.0 |
| hypothetical protein | TPANIC_RS04775 | Not Available | - | 1053998 - 1055617 | 59654.2 |
| iron transporter | TPANIC_RS04780 | Not Available | - | 1055752 - 1056366 | 22085.8 |
| ftr1 family protein | TPANIC_RS04785 | Not Available | - | 1056522 - 1057820 | 46625.1 |
| phenylalanine--trna ligase subunit alpha | TPANIC_RS04790 | Not Available | + | 1057956 - 1059617 | 61236.7 |
| flagellar biosynthesis anti-sigma factor flgm | TPANIC_RS04795 | Not Available | - | 1059669 - 1059950 | 10222.2 |
| ribosomal rna small subunit methyltransferase i | TPANIC_RS04800 | Not Available | - | 1060002 - 1060826 | 29533.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
