Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase family protein | TPANIC_RS04260 | Not Available | + | 941951 - 943234 | 45735.2 |
| peptidoglycan dd-metalloendopeptidase family protein | TPANIC_RS04265 | Not Available | - | 943293 - 944789 | 53661.0 |
| upf0164 family protein | TPANIC_RS04270 | Not Available | - | 944967 - 946406 | 52441.6 |
| yifb family mg chelatase-like aaa atpase | TPANIC_RS04275 | Not Available | - | 946494 - 948425 | 68617.5 |
| flagellin | TPANIC_RS04285 | Not Available | + | 948754 - 949614 | 31176.2 |
| hypothetical protein | TPANIC_RS04290 | Not Available | + | 949629 - 949865 | 8735.89 |
| flagellin | TPANIC_RS04295 | Not Available | + | 949893 - 950750 | 31056.9 |
| flagellar filament capping protein flid | TPANIC_RS04300 | Not Available | + | 951048 - 953216 | 78404.6 |
| hypothetical protein | TPANIC_RS04305 | Not Available | + | 953228 - 953830 | 21703.0 |
| hypothetical protein | TPANIC_RS04310 | Not Available | + | 953827 - 954102 | 10568.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
