Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | TPANIC_RS03210 | Not Available | - | 711456 - 713432 | 75067.6 |
| hemolysin family protein | TPANIC_RS03215 | Not Available | - | 713449 - 714246 | 30400.6 |
| rrna maturation rnase ybey | TPANIC_RS03220 | Not Available | - | 714234 - 714716 | 18013.2 |
| hd family phosphohydrolase | TPANIC_RS03225 | Not Available | - | 714722 - 717169 | 90054.0 |
| abc transporter atp-binding protein | TPANIC_RS03230 | Not Available | + | 717311 - 718450 | 42325.6 |
| abc transporter permease | TPANIC_RS03235 | Not Available | + | 718447 - 719346 | 32474.4 |
| abc transporter permease | TPANIC_RS03240 | Not Available | + | 719339 - 720157 | 29952.8 |
| extracellular solute-binding protein | TPANIC_RS03245 | Not Available | + | 720193 - 721239 | 39754.3 |
| carbon storage regulator csra | TPANIC_RS03250 | Not Available | - | 721294 - 721515 | 8336.05 |
| flagellar assembly protein fliw | TPANIC_RS03255 | Not Available | - | 721509 - 721961 | 16926.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
