Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atpase | TPANIC_RS02600 | Not Available | - | 575762 - 576388 | 23579.3 |
| v-type atp synthase subunit f | TPANIC_RS02605 | Not Available | - | 576394 - 576711 | 11701.2 |
| atp synthase subunit c | TPANIC_RS02610 | Not Available | - | 576734 - 577030 | 9884.42 |
| v-type atp synthase subunit i | TPANIC_RS02615 | Not Available | - | 577032 - 578717 | 62445.4 |
| v0d/ac39 family v-type atpase subunit | TPANIC_RS02620 | Not Available | - | 578710 - 579735 | 38993.9 |
| hypothetical protein | TPANIC_RS02625 | Not Available | - | 579739 - 579951 | 7879.02 |
| preprotein translocase subunit secg | TPANIC_RS02630 | Not Available | - | 580080 - 580496 | 14237.2 |
| triose-phosphate isomerase | TPANIC_RS02635 | Not Available | - | 580646 - 581395 | 26541.9 |
| phosphoglycerate kinase | TPANIC_RS02640 | Not Available | - | 581546 - 582805 | 44946.6 |
| hypothetical protein | TPANIC_RS05310 | Not Available | + | 582777 - 582998 | 7878.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
