Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | TPANIC_RS00200 | Not Available | + | 46946 - 49390 | 88433.8 |
| lysm peptidoglycan-binding domain-containing protein | TPANIC_RS00205 | Not Available | + | 49511 - 50443 | 33202.1 |
| flagellar assembly lytic transglycosylase | TPANIC_RS00210 | Not Available | + | 50547 - 52556 | 77040.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | TPANIC_RS00215 | Not Available | + | 52596 - 54488 | 70179.7 |
| adenosine deaminase | TPANIC_RS00220 | Not Available | - | 54544 - 55443 | 34544.6 |
| stage 0 sporulation family protein | TPANIC_RS00225 | Not Available | - | 55805 - 56431 | 24336.7 |
| yaar family protein | TPANIC_RS00230 | Not Available | - | 56524 - 57045 | 19642.7 |
| polymer-forming cytoskeletal protein | TPANIC_RS00235 | Not Available | - | 57051 - 57482 | 15064.4 |
| m23 family metallopeptidase | TPANIC_RS00240 | Not Available | - | 57504 - 58595 | 39689.4 |
| phosphoribosyltransferase | TPANIC_RS00245 | Not Available | - | 58826 - 59434 | 23209.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
