Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TPANIC_RS02060 | Not Available | + | 451062 - 452057 | 36738.7 |
| hypothetical protein | TPANIC_RS02065 | Not Available | + | 452082 - 452888 | 30085.8 |
| v-type atp synthase subunit e | TPANIC_RS02070 | Not Available | + | 453014 - 453628 | 22320.3 |
| hypothetical protein | TPANIC_RS05595 | Not Available | + | 453628 - 454173 | 20339.4 |
| v-type atp synthase subunit a | TPANIC_RS02080 | Not Available | + | 454170 - 455939 | 65022.8 |
| v-type atp synthase subunit b | TPANIC_RS02085 | Not Available | + | 455943 - 457235 | 47231.9 |
| v-type atp synthase subunit d | TPANIC_RS02090 | Not Available | + | 457247 - 457867 | 23804.1 |
| v-type atp synthase subunit i | TPANIC_RS02095 | Not Available | + | 457876 - 459732 | 68640.3 |
| atp synthase subunit k | TPANIC_RS02100 | Not Available | + | 459769 - 460191 | 14188.6 |
| type iii pantothenate kinase | TPANIC_RS02105 | Not Available | + | 460225 - 461046 | 28473.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
