Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | TPANIC_RS00145 | Not Available | + | 36917 - 38194 | 45544.7 |
| chaperonin groel | TPANIC_RS00150 | Not Available | + | 38313 - 39947 | 57983.9 |
| hypothetical protein | TPANIC_RS00155 | Not Available | + | 40011 - 40289 | 10276.9 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | TPANIC_RS00160 | Not Available | - | 40286 - 41086 | 29380.9 |
| duf1361 domain-containing protein | TPANIC_RS00165 | Not Available | - | 41083 - 41751 | 26100.8 |
| metal abc transporter substrate-binding protein | TPANIC_RS00170 | Not Available | - | 41795 - 42745 | 35435.6 |
| metal abc transporter atp-binding protein | TPANIC_RS00175 | Not Available | + | 42943 - 43659 | 26461.3 |
| metal abc transporter permease | TPANIC_RS00180 | Not Available | + | 43659 - 44459 | 28384.8 |
| d-2-hydroxyacid dehydrogenase | TPANIC_RS00185 | Not Available | - | 44568 - 45563 | 36875.4 |
| pts transporter subunit iic | TPANIC_RS00190 | Not Available | - | 45660 - 46712 | 36925.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
