Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna repair helicase xpb | TPANIC_RS01860 | Not Available | - | 406421 - 408241 | 67601.6 |
| tigr02206 family membrane protein | TPANIC_RS01865 | Not Available | - | 408381 - 409097 | 27121.4 |
| division/cell wall cluster transcriptional repressor mraz | TPANIC_RS01870 | Not Available | + | 409330 - 409779 | 17096.5 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | TPANIC_RS01875 | Not Available | + | 409776 - 410915 | 40939.7 |
| cell division protein ftsl | TPANIC_RS01880 | Not Available | + | 410991 - 411302 | 11722.3 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | TPANIC_RS01885 | Not Available | + | 411286 - 412665 | 50237.8 |
| putative lipid ii flippase ftsw | TPANIC_RS01890 | Not Available | + | 412662 - 413816 | 42717.4 |
| cell division protein ftsq/divib | TPANIC_RS01895 | Not Available | + | 413794 - 414609 | 30596.2 |
| cell division protein ftsa | TPANIC_RS01900 | Not Available | + | 414622 - 415866 | 44238.0 |
| cell division protein ftsz | TPANIC_RS01905 | Not Available | + | 415912 - 417168 | 43841.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
