Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--l-alanine ligase | TPANIC_RS01670 | Not Available | + | 364659 - 366104 | 53765.4 |
| (d)cmp kinase | TPANIC_RS01675 | Not Available | + | 366225 - 366785 | 20737.1 |
| a/g-specific adenine glycosylase | TPANIC_RS01680 | Not Available | + | 366779 - 367612 | 31721.0 |
| transcription-repair coupling factor | TPANIC_RS01685 | Not Available | - | 367617 - 371039 | 129978.0 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | TPANIC_RS01690 | Not Available | + | 371192 - 372283 | 40560.7 |
| duf2715 domain-containing protein | TPANIC_RS01695 | Not Available | + | 372440 - 373141 | 25342.0 |
| duf2715 domain-containing protein | TPANIC_RS01700 | Not Available | + | 373230 - 373940 | 25577.4 |
| gx transporter family protein | TPANIC_RS01705 | Not Available | - | 373960 - 375075 | 40201.4 |
| peptidylprolyl isomerase | TPANIC_RS01710 | Not Available | - | 375054 - 375584 | 18429.6 |
| glutamate-5-semialdehyde dehydrogenase | TPANIC_RS01715 | Not Available | + | 375797 - 377083 | 46585.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
