Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | + | 355005 - 355076 | Not Available |
| decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase | TPANIC_RS01625 | Not Available | - | 355170 - 356636 | 52770.3 |
| lola family protein | TPANIC_RS01630 | Not Available | + | 356815 - 357507 | 25559.9 |
| helix-turn-helix domain-containing protein | TPANIC_RS01635 | Not Available | + | 357532 - 358749 | 45310.9 |
| type ii caax prenyl endopeptidase rce1 family protein | TPANIC_RS05580 | Not Available | - | 358746 - 359288 | 19219.5 |
| comec/rec2 family competence protein | TPANIC_RS01645 | Not Available | + | 359218 - 360831 | 57995.3 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | TPANIC_RS01650 | Not Available | + | 360812 - 361669 | 32277.6 |
| hypothetical protein | TPANIC_RS01655 | Not Available | + | 361687 - 362175 | 18368.2 |
| rlua family pseudouridine synthase | TPANIC_RS01660 | Not Available | + | 362187 - 363182 | 37744.4 |
| folylpolyglutamate synthase/dihydrofolate synthase family protein | TPANIC_RS01665 | Not Available | - | 363168 - 364640 | 54655.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
