Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| parb/repb/spo0j family partition protein | TPANIC_RS01380 | Not Available | - | 288693 - 289667 | 35432.2 |
| para family protein | TPANIC_RS01385 | Not Available | - | 289654 - 290415 | 27343.2 |
| hypothetical protein | TPANIC_RS01390 | Not Available | + | 290548 - 291339 | 29744.1 |
| deoxycytidylate deaminase | TPANIC_RS01395 | Not Available | - | 291377 - 291877 | 18411.2 |
| wecb/taga/cpsf family glycosyltransferase | TPANIC_RS01400 | Not Available | - | 291966 - 292715 | 28941.6 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | TPANIC_RS01405 | Not Available | - | 292694 - 293533 | 31213.4 |
| s41 family peptidase | TPANIC_RS01410 | Not Available | - | 293751 - 295211 | 54532.8 |
| 30s ribosomal protein s1 | TPANIC_RS01415 | Not Available | + | 295400 - 297991 | 95568.2 |
| tetratricopeptide repeat protein | TPANIC_RS01420 | Not Available | + | 298254 - 298973 | 26436.7 |
| pantetheine-phosphate adenylyltransferase | TPANIC_RS01425 | Not Available | + | 299151 - 299630 | 17805.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
