Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pp2c family protein-serine/threonine phosphatase | TPANIC_RS01090 | Not Available | + | 224826 - 226973 | 81444.5 |
| stas domain-containing protein | TPANIC_RS01095 | Not Available | + | 227002 - 227328 | 11771.1 |
| m15 family metallopeptidase | TPANIC_RS01100 | Not Available | + | 227315 - 228112 | 30141.1 |
| hypothetical protein | TPANIC_RS01105 | Not Available | + | 228137 - 228568 | 15598.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | TPANIC_RS01110 | Not Available | + | 228705 - 230144 | 51890.7 |
| leucine-rich repeat domain-containing protein | TPANIC_RS01115 | Not Available | + | 230331 - 231071 | 26570.8 |
| 16s ribosomal rna | Not Available | Not Available | + | 231255 - 232803 | Not Available |
| Trna-ile | Not Available | Not Available | + | 232916 - 232989 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 233099 - 236051 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 236100 - 236210 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
