Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin | TPANIC_RS04560 | Not Available | + | 1007314 - 1007754 | 15794.2 |
| signal peptidase i | TPANIC_RS04565 | Not Available | - | 1007905 - 1009443 | 57622.6 |
| hypothetical protein | TPANIC_RS05620 | Not Available | + | 1009536 - 1010126 | 22216.3 |
| hypothetical protein | TPANIC_RS05660 | Not Available | + | 1010974 - 1011744 | 28194.0 |
| 6-hydroxymethylpterin diphosphokinase mpte-like protein | TPANIC_RS04580 | Not Available | + | 1011783 - 1013489 | 64108.9 |
| mgh1-like glycoside hydrolase domain-containing protein | TPANIC_RS04585 | Not Available | - | 1013573 - 1015003 | 55392.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | TPANIC_RS04590 | Not Available | - | 1015115 - 1016737 | 59460.2 |
| dicarboxylate/amino acid:cation symporter | TPANIC_RS04595 | Not Available | + | 1016873 - 1018096 | 44360.3 |
| alpha/beta hydrolase | TPANIC_RS04600 | Not Available | - | 1018089 - 1019027 | 34600.0 |
| Trna-val | Not Available | Not Available | + | 1019138 - 1019211 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
