Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimm | TPANIC_RS04460 | Not Available | + | 988979 - 989503 | 18946.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | TPANIC_RS04465 | Not Available | + | 989500 - 990252 | 28120.6 |
| 50s ribosomal protein l19 | TPANIC_RS04470 | Not Available | + | 990224 - 990595 | 14192.5 |
| hypothetical protein | TPANIC_RS04475 | Not Available | + | 990592 - 991512 | 33816.2 |
| flhb-like flagellar biosynthesis protein | TPANIC_RS04480 | Not Available | + | 991534 - 991785 | 8996.05 |
| hd-gyp domain-containing protein | TPANIC_RS04485 | Not Available | + | 991870 - 993120 | 46179.3 |
| yran family protein | TPANIC_RS04490 | Not Available | + | 993104 - 993484 | 14586.7 |
| hypothetical protein | TPANIC_RS04495 | Not Available | + | 993481 - 993663 | 6925.51 |
| hypothetical protein | TPANIC_RS04500 | Not Available | + | 993656 - 994042 | 14573.7 |
| tetratricopeptide repeat protein | TPANIC_RS04505 | Not Available | + | 994116 - 995450 | 50771.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
