Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arginine--trna ligase | TPANIC_RS04110 | Not Available | - | 899083 - 900852 | 67135.6 |
| germn domain-containing protein | TPANIC_RS04115 | Not Available | - | 900875 - 901690 | 29158.8 |
| hypothetical protein | TPANIC_RS04120 | Not Available | + | 901763 - 902479 | 26294.8 |
| tyrosine--trna ligase | TPANIC_RS04125 | Not Available | - | 902536 - 903765 | 45081.6 |
| ankyrin repeat domain-containing protein | TPANIC_RS04130 | Not Available | - | 903873 - 906677 | 100694.0 |
| hypothetical protein | TPANIC_RS04135 | Not Available | - | 906818 - 907642 | 31037.5 |
| threonine--trna ligase | TPANIC_RS04140 | Not Available | + | 907790 - 909568 | 67402.6 |
| abc-f family atp-binding cassette domain-containing protein | TPANIC_RS04145 | Not Available | - | 909617 - 911272 | 62236.3 |
| duf4097 family beta strand repeat-containing protein | TPANIC_RS04150 | Not Available | - | 911356 - 912363 | 37366.7 |
| mfs transporter | TPANIC_RS04155 | Not Available | + | 912468 - 914717 | 82285.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
