Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metq/nlpa family abc transporter substrate-binding protein | TPANIC_RS04060 | Not Available | - | 890493 - 891299 | 29083.1 |
| mechanosensitive ion channel family protein | TPANIC_RS04065 | Not Available | - | 891380 - 892255 | 32180.1 |
| superoxide reductase domain-containing protein | TPANIC_RS04070 | Not Available | - | 892373 - 892759 | 13802.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | TPANIC_RS04075 | Not Available | + | 893156 - 895048 | 68107.0 |
| hypothetical protein | TPANIC_RS04080 | Not Available | + | 895045 - 895230 | 7260.95 |
| diadenylate cyclase cdaa | TPANIC_RS04085 | Not Available | + | 895217 - 896038 | 30334.3 |
| ybbr-like domain-containing protein | TPANIC_RS04090 | Not Available | + | 896016 - 896978 | 35306.6 |
| holo-acp synthase | TPANIC_RS04095 | Not Available | + | 896975 - 897352 | 14119.3 |
| duf2225 domain-containing protein | TPANIC_RS04100 | Not Available | + | 897349 - 898233 | 33781.2 |
| trna pseudouridine(38-40) synthase trua | TPANIC_RS04105 | Not Available | + | 898230 - 899015 | 29871.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
