Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| migration/adhesion factor tmpa | TPANIC_RS03800 | Not Available | + | 835524 - 836561 | 37287.3 |
| lysm peptidoglycan-binding domain-containing protein | TPANIC_RS05500 | Not Available | + | 836558 - 837535 | 36962.5 |
| dead/deah box helicase | TPANIC_RS03810 | Not Available | + | 837580 - 839529 | 72500.4 |
| na/pi cotransporter family protein | TPANIC_RS03815 | Not Available | - | 839550 - 841331 | 65377.7 |
| hypothetical protein | TPANIC_RS03820 | Not Available | + | 841335 - 842159 | 30841.2 |
| Trna-lys | Not Available | Not Available | + | 843408 - 843480 | Not Available |
| s1c family serine protease | TPANIC_RS05350 | Not Available | - | 842199 - 843431 | 43473.1 |
| Trna-leu | Not Available | Not Available | + | 843624 - 843707 | Not Available |
| mgtc/sapb family protein | TPANIC_RS03840 | Not Available | + | 843740 - 844414 | 24087.2 |
| endonuclease iii | TPANIC_RS03845 | Not Available | + | 844494 - 845129 | 23420.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
