Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing m23 family metallopeptidase | TPANIC_RS03505 | Not Available | - | 775384 - 776310 | 33624.0 |
| hypothetical protein | TPANIC_RS03510 | Not Available | - | 776372 - 776851 | 16910.1 |
| hypothetical protein | TPANIC_RS03515 | Not Available | + | 776917 - 777432 | 17962.3 |
| rna polymerase sigma factor whig | TPANIC_RS03520 | Not Available | + | 777488 - 778276 | 29889.7 |
| fapa family protein | TPANIC_RS03525 | Not Available | + | 778285 - 780255 | 72026.7 |
| hypothetical protein | TPANIC_RS03530 | Not Available | + | 780292 - 780864 | 21268.0 |
| mind/para family protein | TPANIC_RS03535 | Not Available | - | 780879 - 781793 | 33715.1 |
| flagellar biosynthesis protein flhf | TPANIC_RS03540 | Not Available | - | 781765 - 783078 | 49286.4 |
| flagellar biosynthesis protein flha | TPANIC_RS03545 | Not Available | - | 783113 - 785236 | 77948.5 |
| flagellar biosynthesis protein flhb | TPANIC_RS03550 | Not Available | - | 785245 - 786375 | 43041.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
