Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | Nichols |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Treponema pallidum subsp. pallidum str. Nichols
Accession NumberNC_021490.2
Gene Summary
Adenine Count
268173 bp
Thymine Count
269822 bp
Guanine Count
302933 bp
Cytosine Count
298660 bp
Genome Length
1139633 bp
Protein-coding Genes
984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TPANIC_RS03355 | Not Available | - | 743368 - 743976 | 21756.1 |
| Trna-val | Not Available | Not Available | + | 744066 - 744137 | Not Available |
| hypothetical protein | TPANIC_RS03365 | Not Available | + | 744230 - 745153 | 34765.9 |
| hypothetical protein | TPANIC_RS03370 | Not Available | + | 745150 - 745467 | 11586.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | TPANIC_RS03375 | Not Available | - | 745508 - 746566 | 38133.7 |
| alanine racemase | TPANIC_RS03380 | Not Available | - | 746617 - 747750 | 40314.3 |
| sam-dependent methyltransferase | TPANIC_RS03385 | Not Available | - | 747779 - 748381 | 21318.6 |
| polyprenyl synthetase family protein | TPANIC_RS03390 | Not Available | + | 748474 - 749568 | 40172.8 |
| substrate-binding domain-containing protein | TPANIC_RS03395 | Not Available | + | 749861 - 751072 | 43054.7 |
| sugar abc transporter atp-binding protein | TPANIC_RS03400 | Not Available | + | 751192 - 752682 | 55194.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
